WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45G12C.1.1 Sequence Name  Y45G12C.1.1
Length (nt)  1255   Chromosome Location  V: 2565683-2568882
Chromosome . Primary Identifier  V Chromosome Location . Start  2565683
Chromosome Location . End  2568882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45G12C.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021565 Y45G12C.1 Y45G12C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45G12C.1 Y45G12C.1 1137   V: 2565684-2565812

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45G12C.1.1 2565683 2568882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174905   130   V: 2565683-2565812 Caenorhabditis elegans
Exon174906   132   V: 2565860-2565991 Caenorhabditis elegans
Exon174907   61   V: 2566050-2566110 Caenorhabditis elegans
Exon174909   119   V: 2567031-2567149 Caenorhabditis elegans
Exon174910   186   V: 2567198-2567383 Caenorhabditis elegans
Exon174911   126   V: 2567428-2567553 Caenorhabditis elegans
Exon174912   61   V: 2567734-2567794 Caenorhabditis elegans
Exon174913   124   V: 2567842-2567965 Caenorhabditis elegans
Exon174914   316   V: 2568567-2568882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45G12C.1.1 2565683 2568882 1

1 Sequence

Length
1255

1 Sequence Ontology Term

Identifier Name Description
transcript