WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53E10.5.1 Sequence Name  F53E10.5.1
Length (nt)  1383   Chromosome Location  V: 2596020-2598930
Chromosome . Primary Identifier  V Chromosome Location . Start  2596020
Chromosome Location . End  2598930 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53E10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018761 F53E10.5 F53E10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53E10.5 F53E10.5 1383   V: 2596020-2596145

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53E10.5.1 2596020 2598930 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174913   126   V: 2596020-2596145 Caenorhabditis elegans
Exon174914   288   V: 2596245-2596532 Caenorhabditis elegans
Exon174915   321   V: 2596604-2596924 Caenorhabditis elegans
Exon174916   41   V: 2596978-2597018 Caenorhabditis elegans
Exon174917   168   V: 2597817-2597984 Caenorhabditis elegans
Exon174918   57   V: 2598165-2598221 Caenorhabditis elegans
Exon174919   108   V: 2598271-2598378 Caenorhabditis elegans
Exon174920   57   V: 2598429-2598485 Caenorhabditis elegans
Exon174921   64   V: 2598559-2598622 Caenorhabditis elegans
Exon174922   84   V: 2598725-2598808 Caenorhabditis elegans
Exon174923   69   V: 2598862-2598930 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53E10.5.1 2596020 2598930 -1

1 Sequence

Length
1383

1 Sequence Ontology Term

Identifier Name Description
transcript