WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D8.8.1 Sequence Name  R05D8.8.1
Length (nt)  884   Chromosome Location  V: 2763981-2765200
Chromosome . Primary Identifier  V Chromosome Location . Start  2763981
Chromosome Location . End  2765200 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D8.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000977 dhs-14 R05D8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D8.8 R05D8.8 840   V: 2764019-2764222

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05D8.8.1 2763981 2765200 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175277   242   V: 2763981-2764222 Caenorhabditis elegans
Exon175278   171   V: 2764463-2764633 Caenorhabditis elegans
Exon175279   428   V: 2764680-2765107 Caenorhabditis elegans
Exon175280   43   V: 2765158-2765200 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05D8.8.1 2763981 2765200 -1

1 Sequence

Length
884

1 Sequence Ontology Term

Identifier Name Description
transcript