WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D8.10.1 Sequence Name  R05D8.10.1
Length (nt)  996   Chromosome Location  V: 2768361-2769854
Chromosome . Primary Identifier  V Chromosome Location . Start  2768361
Chromosome Location . End  2769854 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D8.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000978 dhs-15 R05D8.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D8.10 R05D8.10 837   V: 2768419-2768790

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05D8.10.1 2768361 2769854 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175285   430   V: 2768361-2768790 Caenorhabditis elegans
Exon175286   94   V: 2768931-2769024 Caenorhabditis elegans
Exon175287   101   V: 2769071-2769171 Caenorhabditis elegans
Exon175288   233   V: 2769216-2769448 Caenorhabditis elegans
Exon175289   138   V: 2769717-2769854 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05D8.10.1 2768361 2769854 -1

1 Sequence

Length
996

1 Sequence Ontology Term

Identifier Name Description
transcript