WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54E2.5.1 Sequence Name  F54E2.5.1
Length (nt)  1248   Chromosome Location  V: 2814124-2816056
Chromosome . Primary Identifier  V Chromosome Location . Start  2814124
Chromosome Location . End  2816056 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018825 F54E2.5 F54E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54E2.5 F54E2.5 996   V: 2814252-2814398

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54E2.5.1 2814124 2816056 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175579   275   V: 2814124-2814398 Caenorhabditis elegans
Exon175580   84   V: 2814447-2814530 Caenorhabditis elegans
Exon175581   153   V: 2814648-2814800 Caenorhabditis elegans
Exon175582   184   V: 2814849-2815032 Caenorhabditis elegans
Exon175583   130   V: 2815076-2815205 Caenorhabditis elegans
Exon175584   121   V: 2815262-2815382 Caenorhabditis elegans
Exon175585   144   V: 2815706-2815849 Caenorhabditis elegans
Exon175586   157   V: 2815900-2816056 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54E2.5.1 2814124 2816056 -1

1 Sequence

Length
1248

1 Sequence Ontology Term

Identifier Name Description
transcript