WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03D3.11.1 Sequence Name  T03D3.11.1
Length (nt)  1053   Chromosome Location  V: 2844563-2845871
Chromosome . Primary Identifier  V Chromosome Location . Start  2844563
Chromosome Location . End  2845871 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03D3.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005626 srj-44 T03D3.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03D3.11 T03D3.11 1053   V: 2844563-2844776

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03D3.11.1 2844563 2845871 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175636   214   V: 2844563-2844776 Caenorhabditis elegans
Exon175637   170   V: 2844825-2844994 Caenorhabditis elegans
Exon175638   102   V: 2845035-2845136 Caenorhabditis elegans
Exon175639   378   V: 2845184-2845561 Caenorhabditis elegans
Exon175640   189   V: 2845683-2845871 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03D3.11.1 2844563 2845871 -1

1 Sequence

Length
1053

1 Sequence Ontology Term

Identifier Name Description
transcript