WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03D3.1.1 Sequence Name  T03D3.1.1
Length (nt)  1579   Chromosome Location  V: 2849343-2852028
Chromosome . Primary Identifier  V Chromosome Location . Start  2849343
Chromosome Location . End  2852028 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03D3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020182 ugt-53 T03D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03D3.1 T03D3.1 1548   V: 2849365-2849508

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03D3.1.1 2849343 2852028 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175646   166   V: 2849343-2849508 Caenorhabditis elegans
Exon175647   199   V: 2849555-2849753 Caenorhabditis elegans
Exon175648   126   V: 2849802-2849927 Caenorhabditis elegans
Exon175649   75   V: 2850472-2850546 Caenorhabditis elegans
Exon175650   107   V: 2850589-2850695 Caenorhabditis elegans
Exon175651   415   V: 2850745-2851159 Caenorhabditis elegans
Exon175652   126   V: 2851490-2851615 Caenorhabditis elegans
Exon175653   365   V: 2851664-2852028 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03D3.1.1 2849343 2852028 1

1 Sequence

Length
1579

1 Sequence Ontology Term

Identifier Name Description
transcript