WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03D3.6.1 Sequence Name  T03D3.6.1
Length (nt)  1086   Chromosome Location  V: 2835312-2836601
Chromosome . Primary Identifier  V Chromosome Location . Start  2835312
Chromosome Location . End  2836601 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03D3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005627 srj-45 T03D3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03D3.6 T03D3.6 987   V: 2835411-2835567

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03D3.6.1 2835312 2836601 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175664   256   V: 2835312-2835567 Caenorhabditis elegans
Exon175665   170   V: 2835617-2835786 Caenorhabditis elegans
Exon175666   102   V: 2835833-2835934 Caenorhabditis elegans
Exon175667   369   V: 2835984-2836352 Caenorhabditis elegans
Exon175668   189   V: 2836413-2836601 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03D3.6.1 2835312 2836601 -1

1 Sequence

Length
1086

1 Sequence Ontology Term

Identifier Name Description
transcript