WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H27D07.4.1 Sequence Name  H27D07.4.1
Length (nt)  1116   Chromosome Location  V: 2942571-2943959
Chromosome . Primary Identifier  V Chromosome Location . Start  2942571
Chromosome Location . End  2943959 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H27D07.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005884 srw-137 H27D07.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H27D07.4 H27D07.4 1116   V: 2942571-2942639

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H27D07.4.1 2942571 2943959 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175843   69   V: 2942571-2942639 Caenorhabditis elegans
Exon175844   142   V: 2942684-2942825 Caenorhabditis elegans
Exon175845   224   V: 2942956-2943179 Caenorhabditis elegans
Exon175846   592   V: 2943227-2943818 Caenorhabditis elegans
Exon175847   89   V: 2943871-2943959 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H27D07.4.1 2942571 2943959 -1

1 Sequence

Length
1116

1 Sequence Ontology Term

Identifier Name Description
transcript