WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H27D07.6.1 Sequence Name  H27D07.6.1
Length (nt)  1078   Chromosome Location  V: 2944377-2945702
Chromosome . Primary Identifier  V Chromosome Location . Start  2944377
Chromosome Location . End  2945702 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H27D07.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005308 srh-87 H27D07.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H27D07.6 H27D07.6 1056   V: 2944379-2944563

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H27D07.6.1 2944377 2945702 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175848   187   V: 2944377-2944563 Caenorhabditis elegans
Exon175849   513   V: 2944613-2945125 Caenorhabditis elegans
Exon175850   146   V: 2945275-2945420 Caenorhabditis elegans
Exon175851   232   V: 2945471-2945702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H27D07.6.1 2944377 2945702 -1

1 Sequence

Length
1078

1 Sequence Ontology Term

Identifier Name Description
transcript