WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H27D07.3a Sequence Name  H27D07.3a
Length (nt)  1107   Chromosome Location  V: 2939603-2939656
Chromosome . Primary Identifier  V Chromosome Location . Start  2939603
Chromosome Location . End  2939656
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H27D07.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46259 SRW-143, isoform a 42.3 368 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00049503
WBRNAi00016328
WBRNAi00103424

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H27D07.3a 2939603 2939656 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005890 srw-143 H27D07.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:H27D07.3a 2939603 2939656 -1
CDS:H27D07.3a 2939702 2939843 -1
CDS:H27D07.3a 2939907 2940130 -1
CDS:H27D07.3a 2940764 2941361 -1
CDS:H27D07.3a 2941417 2941505 -1

1 Sequence

Length
1107

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H27D07.3a.1 H27D07.3a.1 1107   V: 2939603-2941505