WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44C3.3.1 Sequence Name  C44C3.3.1
Length (nt)  1116   Chromosome Location  V: 2961632-2963060
Chromosome . Primary Identifier  V Chromosome Location . Start  2961632
Chromosome Location . End  2963060 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44C3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005885 srw-138 C44C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44C3.3 C44C3.3 1116   V: 2961632-2961700

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44C3.3.1 2961632 2963060 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175877   69   V: 2961632-2961700 Caenorhabditis elegans
Exon175878   142   V: 2961745-2961886 Caenorhabditis elegans
Exon175879   224   V: 2962050-2962273 Caenorhabditis elegans
Exon175880   592   V: 2962323-2962914 Caenorhabditis elegans
Exon175881   89   V: 2962972-2963060 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44C3.3.1 2961632 2963060 -1

1 Sequence

Length
1116

1 Sequence Ontology Term

Identifier Name Description
transcript