WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44C3.9.1 Sequence Name  C44C3.9.1
Length (nt)  1056   Chromosome Location  V: 2963566-2964886
Chromosome . Primary Identifier  V Chromosome Location . Start  2963566
Chromosome Location . End  2964886 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44C3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005309 srh-88 C44C3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44C3.9 C44C3.9 1056   V: 2963566-2963750

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44C3.9.1 2963566 2964886 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175882   185   V: 2963566-2963750 Caenorhabditis elegans
Exon175883   513   V: 2963796-2964308 Caenorhabditis elegans
Exon175884   146   V: 2964479-2964624 Caenorhabditis elegans
Exon175885   212   V: 2964675-2964886 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44C3.9.1 2963566 2964886 -1

1 Sequence

Length
1056

1 Sequence Ontology Term

Identifier Name Description
transcript