WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44C3.8.1 Sequence Name  C44C3.8.1
Length (nt)  861   Chromosome Location  V: 2986192-2987507
Chromosome . Primary Identifier  V Chromosome Location . Start  2986192
Chromosome Location . End  2987507 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44C3.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005306 srh-85 C44C3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44C3.8 C44C3.8 861   V: 2986192-2986343

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44C3.8.1 2986192 2987507 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175926   152   V: 2986192-2986343 Caenorhabditis elegans
Exon175927   522   V: 2986388-2986909 Caenorhabditis elegans
Exon175928   146   V: 2987271-2987416 Caenorhabditis elegans
Exon175929   41   V: 2987467-2987507 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44C3.8.1 2986192 2987507 -1

1 Sequence

Length
861

1 Sequence Ontology Term

Identifier Name Description
transcript