WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50H11.10.1 Sequence Name  C50H11.10.1
Length (nt)  1014   Chromosome Location  V: 3059640-3062178
Chromosome . Primary Identifier  V Chromosome Location . Start  3059640
Chromosome Location . End  3062178 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50H11.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016856 srt-15 C50H11.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50H11.10 C50H11.10 1014   V: 3059640-3059755

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50H11.10.1 3059640 3062178 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176084   116   V: 3059640-3059755 Caenorhabditis elegans
Exon176085   130   V: 3059803-3059932 Caenorhabditis elegans
Exon176086   150   V: 3059980-3060129 Caenorhabditis elegans
Exon176087   426   V: 3061133-3061558 Caenorhabditis elegans
Exon176088   192   V: 3061987-3062178 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50H11.10.1 3059640 3062178 -1

1 Sequence

Length
1014

1 Sequence Ontology Term

Identifier Name Description
transcript