WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50H11.14.1 Sequence Name  C50H11.14.1
Length (nt)  1062   Chromosome Location  V: 3079449-3080892
Chromosome . Primary Identifier  V Chromosome Location . Start  3079449
Chromosome Location . End  3080892 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50H11.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016859 srt-5 C50H11.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50H11.14 C50H11.14 1062   V: 3079449-3079787

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50H11.14.1 3079449 3080892 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176117   339   V: 3079449-3079787 Caenorhabditis elegans
Exon176118   147   V: 3079838-3079984 Caenorhabditis elegans
Exon176119   423   V: 3080049-3080471 Caenorhabditis elegans
Exon176120   153   V: 3080740-3080892 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50H11.14.1 3079449 3080892 -1

1 Sequence

Length
1062

1 Sequence Ontology Term

Identifier Name Description
transcript