WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50H11.2.1 Sequence Name  C50H11.2.1
Length (nt)  1053   Chromosome Location  V: 3086560-3087986
Chromosome . Primary Identifier  V Chromosome Location . Start  3086560
Chromosome Location . End  3087986 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50H11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016850 srt-8 C50H11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50H11.2 C50H11.2 1053   V: 3086560-3086706

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50H11.2.1 3086560 3087986 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176128   147   V: 3086560-3086706 Caenorhabditis elegans
Exon176129   423   V: 3086757-3087179 Caenorhabditis elegans
Exon176130   147   V: 3087456-3087602 Caenorhabditis elegans
Exon176131   336   V: 3087651-3087986 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50H11.2.1 3086560 3087986 1

1 Sequence

Length
1053

1 Sequence Ontology Term

Identifier Name Description
transcript