WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02C9.2.1 Sequence Name  F02C9.2.1
Length (nt)  2418   Chromosome Location  V: 3133705-3137382
Chromosome . Primary Identifier  V Chromosome Location . Start  3133705
Chromosome Location . End  3137382 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02C9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017173 F02C9.2 F02C9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02C9.2 F02C9.2 2418   V: 3133705-3133832

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F02C9.2.1 3133705 3137382 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176211   128   V: 3133705-3133832 Caenorhabditis elegans
Exon176212   94   V: 3133877-3133970 Caenorhabditis elegans
Exon176213   115   V: 3134090-3134204 Caenorhabditis elegans
Exon176214   123   V: 3134249-3134371 Caenorhabditis elegans
Exon176215   85   V: 3134419-3134503 Caenorhabditis elegans
Exon176216   79   V: 3134554-3134632 Caenorhabditis elegans
Exon176217   107   V: 3134680-3134786 Caenorhabditis elegans
Exon176218   165   V: 3134846-3135010 Caenorhabditis elegans
Exon176219   315   V: 3135061-3135375 Caenorhabditis elegans
Exon176220   139   V: 3135430-3135568 Caenorhabditis elegans
Exon176221   76   V: 3136015-3136090 Caenorhabditis elegans
Exon176222   83   V: 3136139-3136221 Caenorhabditis elegans
Exon176223   379   V: 3136268-3136646 Caenorhabditis elegans
Exon176224   172   V: 3136715-3136886 Caenorhabditis elegans
Exon176225   120   V: 3136933-3137052 Caenorhabditis elegans
Exon176226   135   V: 3137097-3137231 Caenorhabditis elegans
Exon176227   103   V: 3137280-3137382 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F02C9.2.1 3133705 3137382 1

1 Sequence

Length
2418

1 Sequence Ontology Term

Identifier Name Description
transcript