WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36C5.2a.1 Sequence Name  C36C5.2a.1
Length (nt)  993   Chromosome Location  V: 3176461-3177978
Chromosome . Primary Identifier  V Chromosome Location . Start  3176461
Chromosome Location . End  3177978 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36C5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016471 srab-8 C36C5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36C5.2a C36C5.2a 993   V: 3176461-3176687

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36C5.2a.1 3176461 3177978 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176298   227   V: 3176461-3176687 Caenorhabditis elegans
Exon176300   229   V: 3177044-3177272 Caenorhabditis elegans
Exon176302   186   V: 3177319-3177504 Caenorhabditis elegans
Exon176305   196   V: 3177581-3177776 Caenorhabditis elegans
Exon176306   155   V: 3177824-3177978 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36C5.2a.1 3176461 3177978 1

1 Sequence

Length
993

1 Sequence Ontology Term

Identifier Name Description
transcript