WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36C5.5.1 Sequence Name  C36C5.5.1
Length (nt)  687   Chromosome Location  V: 3157086-3157871
Chromosome . Primary Identifier  V Chromosome Location . Start  3157086
Chromosome Location . End  3157871 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36C5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016474 exh-1 C36C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36C5.5 C36C5.5 615   V: 3157095-3157235

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36C5.5.1 3157086 3157871 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176325   150   V: 3157086-3157235 Caenorhabditis elegans
Exon176326   414   V: 3157286-3157699 Caenorhabditis elegans
Exon176327   123   V: 3157749-3157871 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36C5.5.1 3157086 3157871 1

1 Sequence

Length
687

1 Sequence Ontology Term

Identifier Name Description
transcript