WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K08D9.3f Sequence Name  K08D9.3f
Length (nt)  1542   Chromosome Location  V: 3210229-3210505
Chromosome . Primary Identifier  V Chromosome Location . Start  3210229
Chromosome Location . End  3210505
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08D9.3f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19983 APX-1, isoform f 55.6 513 Caenorhabditis elegans
 

Other

40 RNAi

WormBase ID
WBRNAi00106566
WBRNAi00081739
WBRNAi00081741
WBRNAi00081729
WBRNAi00081731
WBRNAi00081733
WBRNAi00050277
WBRNAi00081067
WBRNAi00081070
WBRNAi00027585
WBRNAi00063586
WBRNAi00063591
WBRNAi00063594
WBRNAi00063595
WBRNAi00063598
WBRNAi00080995
WBRNAi00080994
WBRNAi00081011
WBRNAi00081012
WBRNAi00081027
WBRNAi00081031
WBRNAi00081033
WBRNAi00081032
WBRNAi00081037
WBRNAi00081038
WBRNAi00081041
WBRNAi00081042
WBRNAi00081045
WBRNAi00081047
WBRNAi00081046

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K08D9.3f 3210229 3210505 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000168 apx-1 K08D9.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:K08D9.3f 3210229 3210505 1
CDS:K08D9.3f 3212092 3212215 1
CDS:K08D9.3f 3212269 3212390 1
CDS:K08D9.3f 3215252 3215446 1
CDS:K08D9.3f 3216638 3216808 1
CDS:K08D9.3f 3218953 3219261 1
CDS:K08D9.3f 3220717 3220883 1
CDS:K08D9.3f 3222273 3222449 1

1 Sequence

Length
1542

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K08D9.3f.1 K08D9.3f.1 2347   V: 3210196-3223221