WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08D9.2.1 Sequence Name  K08D9.2.1
Length (nt)  1563   Chromosome Location  V: 3227673-3230170
Chromosome . Primary Identifier  V Chromosome Location . Start  3227673
Chromosome Location . End  3230170 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08D9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019524 K08D9.2 K08D9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08D9.2 K08D9.2 1398   V: 3227796-3227917

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08D9.2.1 3227673 3230170 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176400   245   V: 3227673-3227917 Caenorhabditis elegans
Exon176401   136   V: 3227970-3228105 Caenorhabditis elegans
Exon176402   283   V: 3228160-3228442 Caenorhabditis elegans
Exon176403   98   V: 3228493-3228590 Caenorhabditis elegans
Exon176404   153   V: 3228636-3228788 Caenorhabditis elegans
Exon176405   104   V: 3229065-3229168 Caenorhabditis elegans
Exon176406   267   V: 3229417-3229683 Caenorhabditis elegans
Exon176407   277   V: 3229894-3230170 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08D9.2.1 3227673 3230170 1

1 Sequence

Length
1563

1 Sequence Ontology Term

Identifier Name Description
transcript