WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28A11.15.1 Sequence Name  T28A11.15.1
Length (nt)  939   Chromosome Location  V: 3254777-3256151
Chromosome . Primary Identifier  V Chromosome Location . Start  3254777
Chromosome Location . End  3256151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28A11.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020877 srt-63 T28A11.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28A11.15 T28A11.15 939   V: 3254777-3254885

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28A11.15.1 3254777 3256151 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176516   109   V: 3254777-3254885 Caenorhabditis elegans
Exon176517   100   V: 3254934-3255033 Caenorhabditis elegans
Exon176518   121   V: 3255216-3255336 Caenorhabditis elegans
Exon176519   210   V: 3255395-3255604 Caenorhabditis elegans
Exon176520   126   V: 3255661-3255786 Caenorhabditis elegans
Exon176521   156   V: 3255836-3255991 Caenorhabditis elegans
Exon176522   117   V: 3256035-3256151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28A11.15.1 3254777 3256151 -1

1 Sequence

Length
939

1 Sequence Ontology Term

Identifier Name Description
transcript