WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17B7.8b.1 Sequence Name  C17B7.8b.1
Length (nt)  1569   Chromosome Location  V: 3320748-3324278
Chromosome . Primary Identifier  V Chromosome Location . Start  3320748
Chromosome Location . End  3324278 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17B7.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015882 C17B7.8 C17B7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17B7.8b C17B7.8b 1545   V: 3320748-3320954

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17B7.8b.1 3320748 3324278 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176645   207   V: 3320748-3320954 Caenorhabditis elegans
Exon176647   177   V: 3321010-3321186 Caenorhabditis elegans
Exon176649   114   V: 3321472-3321585 Caenorhabditis elegans
Exon176651   147   V: 3321653-3321799 Caenorhabditis elegans
Exon176653   205   V: 3321892-3322096 Caenorhabditis elegans
Exon176655   302   V: 3322140-3322441 Caenorhabditis elegans
Exon176657   222   V: 3323649-3323870 Caenorhabditis elegans
Exon176658   111   V: 3323920-3324030 Caenorhabditis elegans
Exon176659   84   V: 3324195-3324278 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17B7.8b.1 3320748 3324278 -1

1 Sequence

Length
1569

1 Sequence Ontology Term

Identifier Name Description
transcript