WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17B7.10a.1 Sequence Name  C17B7.10a.1
Length (nt)  1485   Chromosome Location  V: 3340175-3342006
Chromosome . Primary Identifier  V Chromosome Location . Start  3340175
Chromosome Location . End  3342006 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17B7.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015884 C17B7.10 C17B7.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17B7.10a C17B7.10a 1446   V: 3340214-3340354

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17B7.10a.1 3340175 3342006 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176729   180   V: 3340175-3340354 Caenorhabditis elegans
Exon176731   177   V: 3340402-3340578 Caenorhabditis elegans
Exon176733   114   V: 3340622-3340735 Caenorhabditis elegans
Exon176735   147   V: 3340786-3340932 Caenorhabditis elegans
Exon176737   214   V: 3340976-3341189 Caenorhabditis elegans
Exon176739   302   V: 3341264-3341565 Caenorhabditis elegans
Exon176742   195   V: 3341610-3341804 Caenorhabditis elegans
Exon176743   156   V: 3341851-3342006 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17B7.10a.1 3340175 3342006 -1

1 Sequence

Length
1485

1 Sequence Ontology Term

Identifier Name Description
transcript