WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04E12.5b.1 Sequence Name  C04E12.5b.1
Length (nt)  1455   Chromosome Location  V: 3358643-3361093
Chromosome . Primary Identifier  V Chromosome Location . Start  3358643
Chromosome Location . End  3361093 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04E12.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015435 C04E12.5 C04E12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04E12.5b C04E12.5b 1455   V: 3358643-3358710

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04E12.5b.1 3358643 3361093 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176758   68   V: 3358643-3358710 Caenorhabditis elegans
Exon176760   122   V: 3358809-3358930 Caenorhabditis elegans
Exon176762   117   V: 3358973-3359089 Caenorhabditis elegans
Exon176764   236   V: 3359142-3359377 Caenorhabditis elegans
Exon176766   129   V: 3359432-3359560 Caenorhabditis elegans
Exon176768   69   V: 3359607-3359675 Caenorhabditis elegans
Exon176770   88   V: 3359979-3360066 Caenorhabditis elegans
Exon176772   81   V: 3360277-3360357 Caenorhabditis elegans
Exon176774   254   V: 3360409-3360662 Caenorhabditis elegans
Exon176776   126   V: 3360710-3360835 Caenorhabditis elegans
Exon176778   72   V: 3360883-3360954 Caenorhabditis elegans
Exon176780   93   V: 3361001-3361093 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04E12.5b.1 3358643 3361093 1

1 Sequence

Length
1455

1 Sequence Ontology Term

Identifier Name Description
transcript