WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04E12.4.1 Sequence Name  C04E12.4.1
Length (nt)  1921   Chromosome Location  V: 3362775-3368344
Chromosome . Primary Identifier  V Chromosome Location . Start  3362775
Chromosome Location . End  3368344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04E12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015434 C04E12.4 C04E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04E12.4 C04E12.4 1830   V: 3362800-3362861

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04E12.4.1 3362775 3368344 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176781   87   V: 3362775-3362861 Caenorhabditis elegans
Exon176782   125   V: 3363036-3363160 Caenorhabditis elegans
Exon176783   227   V: 3363253-3363479 Caenorhabditis elegans
Exon176784   126   V: 3363529-3363654 Caenorhabditis elegans
Exon176785   72   V: 3363699-3363770 Caenorhabditis elegans
Exon176786   97   V: 3363821-3363917 Caenorhabditis elegans
Exon176787   236   V: 3365211-3365446 Caenorhabditis elegans
Exon176788   129   V: 3365500-3365628 Caenorhabditis elegans
Exon176789   69   V: 3365674-3365742 Caenorhabditis elegans
Exon176790   88   V: 3367195-3367282 Caenorhabditis elegans
Exon176791   57   V: 3367490-3367546 Caenorhabditis elegans
Exon176792   254   V: 3367598-3367851 Caenorhabditis elegans
Exon176793   123   V: 3367899-3368021 Caenorhabditis elegans
Exon176794   72   V: 3368068-3368139 Caenorhabditis elegans
Exon176797   159   V: 3368186-3368344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04E12.4.1 3362775 3368344 1

1 Sequence

Length
1921

1 Sequence Ontology Term

Identifier Name Description
transcript