WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C04E12.5a Sequence Name  C04E12.5a
Length (nt)  1446   Chromosome Location  V: 3358643-3358710
Chromosome . Primary Identifier  V Chromosome Location . Start  3358643
Chromosome Location . End  3358710
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04E12.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35221 C04E12.5, isoform a 54.5 481 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00039598
WBRNAi00010111
WBRNAi00076074
WBRNAi00028425

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C04E12.5a 3358643 3358710 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015435 C04E12.5 C04E12.5 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C04E12.5a 3358643 3358710 1
CDS:C04E12.5a 3358809 3358921 1
CDS:C04E12.5a 3358973 3359089 1
CDS:C04E12.5a 3359142 3359377 1
CDS:C04E12.5a 3359432 3359560 1
CDS:C04E12.5a 3359607 3359675 1
CDS:C04E12.5a 3359979 3360066 1
CDS:C04E12.5a 3360277 3360357 1
CDS:C04E12.5a 3360409 3360662 1
CDS:C04E12.5a 3360710 3360835 1
CDS:C04E12.5a 3360883 3360954 1
CDS:C04E12.5a 3361001 3361093 1

1 Sequence

Length
1446

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C04E12.5a.1 C04E12.5a.1 1522   V: 3358567-3361093