WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20D4.3a.1 Sequence Name  T20D4.3a.1
Length (nt)  2124   Chromosome Location  V: 3418228-3422779
Chromosome . Primary Identifier  V Chromosome Location . Start  3418228
Chromosome Location . End  3422779 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20D4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020609 T20D4.3 T20D4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20D4.3a T20D4.3a 2043   V: 3418263-3418324

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T20D4.3a.1 3418228 3422779 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176923   97   V: 3418228-3418324 Caenorhabditis elegans
Exon176925   110   V: 3418500-3418609 Caenorhabditis elegans
Exon176927   51   V: 3418657-3418707 Caenorhabditis elegans
Exon176929   236   V: 3418898-3419133 Caenorhabditis elegans
Exon176931   111   V: 3419182-3419292 Caenorhabditis elegans
Exon176933   84   V: 3419357-3419440 Caenorhabditis elegans
Exon176935   85   V: 3419487-3419571 Caenorhabditis elegans
Exon176937   87   V: 3419645-3419731 Caenorhabditis elegans
Exon176939   233   V: 3420504-3420736 Caenorhabditis elegans
Exon176941   126   V: 3420781-3420906 Caenorhabditis elegans
Exon176943   69   V: 3420954-3421022 Caenorhabditis elegans
Exon176945   88   V: 3421074-3421161 Caenorhabditis elegans
Exon176947   99   V: 3421226-3421324 Caenorhabditis elegans
Exon176949   251   V: 3421857-3422107 Caenorhabditis elegans
Exon176951   132   V: 3422157-3422288 Caenorhabditis elegans
Exon176953   72   V: 3422334-3422405 Caenorhabditis elegans
Exon176955   106   V: 3422462-3422567 Caenorhabditis elegans
Exon176958   87   V: 3422693-3422779 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T20D4.3a.1 3418228 3422779 1

1 Sequence

Length
2124

1 Sequence Ontology Term

Identifier Name Description
transcript