WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20D4.3b.1 Sequence Name  T20D4.3b.1
Length (nt)  2064   Chromosome Location  V: 3418263-3422733
Chromosome . Primary Identifier  V Chromosome Location . Start  3418263
Chromosome Location . End  3422733 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20D4.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020609 T20D4.3 T20D4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20D4.3b T20D4.3b 2064   V: 3418263-3418324

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T20D4.3b.1 3418263 3422733 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176924   62   V: 3418263-3418324 Caenorhabditis elegans
Exon176926   110   V: 3418500-3418609 Caenorhabditis elegans
Exon176928   51   V: 3418657-3418707 Caenorhabditis elegans
Exon176930   236   V: 3418898-3419133 Caenorhabditis elegans
Exon176932   132   V: 3419182-3419313 Caenorhabditis elegans
Exon176934   84   V: 3419357-3419440 Caenorhabditis elegans
Exon176936   85   V: 3419487-3419571 Caenorhabditis elegans
Exon176938   87   V: 3419645-3419731 Caenorhabditis elegans
Exon176940   233   V: 3420504-3420736 Caenorhabditis elegans
Exon176942   126   V: 3420781-3420906 Caenorhabditis elegans
Exon176944   69   V: 3420954-3421022 Caenorhabditis elegans
Exon176946   88   V: 3421074-3421161 Caenorhabditis elegans
Exon176948   99   V: 3421226-3421324 Caenorhabditis elegans
Exon176950   251   V: 3421857-3422107 Caenorhabditis elegans
Exon176952   132   V: 3422157-3422288 Caenorhabditis elegans
Exon176954   72   V: 3422334-3422405 Caenorhabditis elegans
Exon176956   106   V: 3422462-3422567 Caenorhabditis elegans
Exon176957   41   V: 3422693-3422733 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T20D4.3b.1 3418263 3422733 1

1 Sequence

Length
2064

1 Sequence Ontology Term

Identifier Name Description
transcript