WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20C4.1a.1 Sequence Name  T20C4.1a.1
Length (nt)  1441   Chromosome Location  V: 3431940-3433751
Chromosome . Primary Identifier  V Chromosome Location . Start  3431940
Chromosome Location . End  3433751 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20C4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005597 srj-9 T20C4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20C4.1a T20C4.1a 1029   V: 3432259-3432450

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20C4.1a.1 3431940 3433751 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176984   511   V: 3431940-3432450 Caenorhabditis elegans
Exon176986   167   V: 3432514-3432680 Caenorhabditis elegans
Exon176990   88   V: 3432792-3432879 Caenorhabditis elegans
Exon176994   117   V: 3432926-3433042 Caenorhabditis elegans
Exon176998   102   V: 3433091-3433192 Caenorhabditis elegans
Exon177002   96   V: 3433236-3433331 Caenorhabditis elegans
Exon177009   360   V: 3433392-3433751 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20C4.1a.1 3431940 3433751 1

1 Sequence

Length
1441

1 Sequence Ontology Term

Identifier Name Description
transcript