WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20C4.1d.1 Sequence Name  T20C4.1d.1
Length (nt)  753   Chromosome Location  V: 3432598-3433658
Chromosome . Primary Identifier  V Chromosome Location . Start  3432598
Chromosome Location . End  3433658 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20C4.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005597 srj-9 T20C4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20C4.1d T20C4.1d 753   V: 3432598-3432680

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20C4.1d.1 3432598 3433658 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon176989   83   V: 3432598-3432680 Caenorhabditis elegans
Exon176993   88   V: 3432792-3432879 Caenorhabditis elegans
Exon176997   117   V: 3432926-3433042 Caenorhabditis elegans
Exon176999   102   V: 3433091-3433192 Caenorhabditis elegans
Exon177005   96   V: 3433236-3433331 Caenorhabditis elegans
Exon177008   267   V: 3433392-3433658 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20C4.1d.1 3432598 3433658 1

1 Sequence

Length
753

1 Sequence Ontology Term

Identifier Name Description
transcript