WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27E11.2.1 Sequence Name  F27E11.2.1
Length (nt)  1994   Chromosome Location  V: 3460219-3463215
Chromosome . Primary Identifier  V Chromosome Location . Start  3460219
Chromosome Location . End  3463215 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27E11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017868 slc-28.2 F27E11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27E11.2 F27E11.2 1728   V: 3460225-3460294

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27E11.2.1 3460219 3463215 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177017   76   V: 3460219-3460294 Caenorhabditis elegans
Exon177018   120   V: 3460341-3460460 Caenorhabditis elegans
Exon177019   175   V: 3460508-3460682 Caenorhabditis elegans
Exon177020   142   V: 3460748-3460889 Caenorhabditis elegans
Exon177021   603   V: 3461248-3461850 Caenorhabditis elegans
Exon177022   269   V: 3461899-3462167 Caenorhabditis elegans
Exon177023   91   V: 3462515-3462605 Caenorhabditis elegans
Exon177024   181   V: 3462655-3462835 Caenorhabditis elegans
Exon177025   337   V: 3462879-3463215 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27E11.2.1 3460219 3463215 1

1 Sequence

Length
1994

1 Sequence Ontology Term

Identifier Name Description
transcript