WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02A12.8.1 Sequence Name  C02A12.8.1
Length (nt)  2109   Chromosome Location  V: 3471870-3475121
Chromosome . Primary Identifier  V Chromosome Location . Start  3471870
Chromosome Location . End  3475121 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02A12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044088 oac-2 C02A12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02A12.8 C02A12.8 1938   V: 3472041-3472208

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02A12.8.1 3471870 3475121 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177046   339   V: 3471870-3472208 Caenorhabditis elegans
Exon177047   280   V: 3472272-3472551 Caenorhabditis elegans
Exon177048   106   V: 3472598-3472703 Caenorhabditis elegans
Exon177049   121   V: 3472756-3472876 Caenorhabditis elegans
Exon177050   311   V: 3473250-3473560 Caenorhabditis elegans
Exon177051   121   V: 3473617-3473737 Caenorhabditis elegans
Exon177052   333   V: 3473787-3474119 Caenorhabditis elegans
Exon177053   129   V: 3474480-3474608 Caenorhabditis elegans
Exon177054   172   V: 3474657-3474828 Caenorhabditis elegans
Exon177055   93   V: 3474876-3474968 Caenorhabditis elegans
Exon177056   104   V: 3475018-3475121 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02A12.8.1 3471870 3475121 -1

1 Sequence

Length
2109

1 Sequence Ontology Term

Identifier Name Description
transcript