WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02A12.3.1 Sequence Name  C02A12.3.1
Length (nt)  918   Chromosome Location  V: 3478031-3480446
Chromosome . Primary Identifier  V Chromosome Location . Start  3478031
Chromosome Location . End  3480446 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02A12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015316 srbc-30 C02A12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02A12.3 C02A12.3 918   V: 3478031-3478177

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02A12.3.1 3478031 3480446 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177063   147   V: 3478031-3478177 Caenorhabditis elegans
Exon177064   99   V: 3478222-3478320 Caenorhabditis elegans
Exon177065   111   V: 3478369-3478479 Caenorhabditis elegans
Exon177068   466   V: 3479832-3480297 Caenorhabditis elegans
Exon177069   95   V: 3480352-3480446 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02A12.3.1 3478031 3480446 -1

1 Sequence

Length
918

1 Sequence Ontology Term

Identifier Name Description
transcript