WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02A12.2.1 Sequence Name  C02A12.2.1
Length (nt)  936   Chromosome Location  V: 3469445-3470882
Chromosome . Primary Identifier  V Chromosome Location . Start  3469445
Chromosome Location . End  3470882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02A12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015315 srbc-29 C02A12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02A12.2 C02A12.2 891   V: 3469490-3469636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02A12.2.1 3469445 3470882 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177095   192   V: 3469445-3469636 Caenorhabditis elegans
Exon177096   99   V: 3469678-3469776 Caenorhabditis elegans
Exon177097   108   V: 3469823-3469930 Caenorhabditis elegans
Exon177098   365   V: 3470247-3470611 Caenorhabditis elegans
Exon177099   77   V: 3470660-3470736 Caenorhabditis elegans
Exon177100   95   V: 3470788-3470882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02A12.2.1 3469445 3470882 -1

1 Sequence

Length
936

1 Sequence Ontology Term

Identifier Name Description
transcript