WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02A12.5.1 Sequence Name  C02A12.5.1
Length (nt)  1073   Chromosome Location  V: 3485549-3486957
Chromosome . Primary Identifier  V Chromosome Location . Start  3485549
Chromosome Location . End  3486957 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02A12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015317 srbc-32 C02A12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02A12.5 C02A12.5 894   V: 3485671-3485823

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02A12.5.1 3485549 3486957 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177078   275   V: 3485549-3485823 Caenorhabditis elegans
Exon177079   105   V: 3485873-3485977 Caenorhabditis elegans
Exon177080   102   V: 3486023-3486124 Caenorhabditis elegans
Exon177081   362   V: 3486175-3486536 Caenorhabditis elegans
Exon177082   77   V: 3486585-3486661 Caenorhabditis elegans
Exon177083   152   V: 3486806-3486957 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02A12.5.1 3485549 3486957 -1

1 Sequence

Length
1073

1 Sequence Ontology Term

Identifier Name Description
transcript