WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07G3.9a.2 Sequence Name  C07G3.9a.2
Length (nt)  1752   Chromosome Location  V: 3503080-3506352
Chromosome . Primary Identifier  V Chromosome Location . Start  3503080
Chromosome Location . End  3506352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07G3.9a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015577 ugt-64 C07G3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07G3.9a C07G3.9a 1506   V: 3503206-3503599

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07G3.9a.2 3503080 3506352 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177109   520   V: 3503080-3503599 Caenorhabditis elegans
Exon177114   238   V: 3503650-3503887 Caenorhabditis elegans
Exon177118   88   V: 3504046-3504133 Caenorhabditis elegans
Exon177122   268   V: 3504190-3504457 Caenorhabditis elegans
Exon177126   221   V: 3504834-3505054 Caenorhabditis elegans
Exon177130   74   V: 3505109-3505182 Caenorhabditis elegans
Exon177135   131   V: 3505228-3505358 Caenorhabditis elegans
Exon177138   105   V: 3505592-3505696 Caenorhabditis elegans
Exon177141   107   V: 3506246-3506352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07G3.9a.2 3503080 3506352 -1

1 Sequence

Length
1752

1 Sequence Ontology Term

Identifier Name Description
transcript