WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07G3.4.1 Sequence Name  C07G3.4.1
Length (nt)  1029   Chromosome Location  V: 3512681-3514343
Chromosome . Primary Identifier  V Chromosome Location . Start  3512681
Chromosome Location . End  3514343 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07G3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006257 str-226 C07G3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07G3.4 C07G3.4 1029   V: 3512681-3512878

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07G3.4.1 3512681 3514343 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177154   198   V: 3512681-3512878 Caenorhabditis elegans
Exon177156   167   V: 3513172-3513338 Caenorhabditis elegans
Exon177157   135   V: 3513385-3513519 Caenorhabditis elegans
Exon177158   142   V: 3513566-3513707 Caenorhabditis elegans
Exon177159   313   V: 3513904-3514216 Caenorhabditis elegans
Exon177160   74   V: 3514270-3514343 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07G3.4.1 3512681 3514343 1

1 Sequence

Length
1029

1 Sequence Ontology Term

Identifier Name Description
transcript