WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07G3.2.1 Sequence Name  C07G3.2.1
Length (nt)  750   Chromosome Location  V: 3523587-3524679
Chromosome . Primary Identifier  V Chromosome Location . Start  3523587
Chromosome Location . End  3524679 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07G3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015574 irg-1 C07G3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07G3.2 C07G3.2 639   V: 3523594-3523778

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07G3.2.1 3523587 3524679 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177175   192   V: 3523587-3523778 Caenorhabditis elegans
Exon177176   123   V: 3523826-3523948 Caenorhabditis elegans
Exon177177   143   V: 3524197-3524339 Caenorhabditis elegans
Exon177178   292   V: 3524388-3524679 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07G3.2.1 3523587 3524679 1

1 Sequence

Length
750

1 Sequence Ontology Term

Identifier Name Description
transcript