WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07G3.6.1 Sequence Name  C07G3.6.1
Length (nt)  1044   Chromosome Location  V: 3507822-3509251
Chromosome . Primary Identifier  V Chromosome Location . Start  3507822
Chromosome Location . End  3509251 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07G3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006256 str-225 C07G3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07G3.6 C07G3.6 1044   V: 3507822-3508019

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07G3.6.1 3507822 3509251 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177197   198   V: 3507822-3508019 Caenorhabditis elegans
Exon177198   167   V: 3508072-3508238 Caenorhabditis elegans
Exon177199   135   V: 3508385-3508519 Caenorhabditis elegans
Exon177200   142   V: 3508567-3508708 Caenorhabditis elegans
Exon177201   313   V: 3508802-3509114 Caenorhabditis elegans
Exon177202   89   V: 3509163-3509251 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07G3.6.1 3507822 3509251 1

1 Sequence

Length
1044

1 Sequence Ontology Term

Identifier Name Description
transcript