WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24A6.8a.1 Sequence Name  T24A6.8a.1
Length (nt)  1434   Chromosome Location  V: 3532914-3535360
Chromosome . Primary Identifier  V Chromosome Location . Start  3532914
Chromosome Location . End  3535360 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24A6.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020748 nhr-221 T24A6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24A6.8a T24A6.8a 1197   V: 3533026-3533297

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T24A6.8a.1 3532914 3535360 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177199   384   V: 3532914-3533297 Caenorhabditis elegans
Exon177201   107   V: 3533348-3533454 Caenorhabditis elegans
Exon177203   207   V: 3533503-3533709 Caenorhabditis elegans
Exon177205   86   V: 3533997-3534082 Caenorhabditis elegans
Exon177207   278   V: 3534144-3534421 Caenorhabditis elegans
Exon177210   172   V: 3534881-3535052 Caenorhabditis elegans
Exon177211   200   V: 3535161-3535360 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T24A6.8a.1 3532914 3535360 -1

1 Sequence

Length
1434

1 Sequence Ontology Term

Identifier Name Description
transcript