WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24A6.11.1 Sequence Name  T24A6.11.1
Length (nt)  1088   Chromosome Location  V: 3541586-3543444
Chromosome . Primary Identifier  V Chromosome Location . Start  3541586
Chromosome Location . End  3543444 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24A6.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020750 nhr-222 T24A6.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24A6.11 T24A6.11 1032   V: 3541642-3541886

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T24A6.11.1 3541586 3543444 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177252   301   V: 3541586-3541886 Caenorhabditis elegans
Exon177253   125   V: 3541947-3542071 Caenorhabditis elegans
Exon177254   128   V: 3542116-3542243 Caenorhabditis elegans
Exon177255   111   V: 3542287-3542397 Caenorhabditis elegans
Exon177256   254   V: 3542669-3542922 Caenorhabditis elegans
Exon177257   94   V: 3543164-3543257 Caenorhabditis elegans
Exon177258   75   V: 3543370-3543444 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T24A6.11.1 3541586 3543444 -1

1 Sequence

Length
1088

1 Sequence Ontology Term

Identifier Name Description
transcript