WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40C5.2.1 Sequence Name  F40C5.2.1
Length (nt)  523   Chromosome Location  V: 3570995-3571610
Chromosome . Primary Identifier  V Chromosome Location . Start  3570995
Chromosome Location . End  3571610 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40C5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018229 F40C5.2 F40C5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40C5.2 F40C5.2 150   V: 3571196-3571308

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40C5.2.1 3570995 3571610 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177311   131   V: 3570995-3571125 Caenorhabditis elegans
Exon177313   136   V: 3571173-3571308 Caenorhabditis elegans
Exon177314   256   V: 3571355-3571610 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40C5.2.1 3570995 3571610 1

1 Sequence

Length
523

1 Sequence Ontology Term

Identifier Name Description
transcript