WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T22F3.3a Sequence Name  T22F3.3a
Length (nt)  2649   Chromosome Location  V: 3579168-3579221
Chromosome . Primary Identifier  V Chromosome Location . Start  3579168
Chromosome Location . End  3579221
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22F3.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24003 PYGL-1, isoform a 101.6 882 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00053844
WBRNAi00014625
WBRNAi00014626
WBRNAi00014627
WBRNAi00014628
WBRNAi00014629
WBRNAi00014632
WBRNAi00019034
WBRNAi00035819
WBRNAi00022618
WBRNAi00007626
WBRNAi00106213
WBRNAi00116035
WBRNAi00116033

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T22F3.3a 3579168 3579221 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020696 pygl-1 T22F3.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T22F3.3a 3579168 3579221 1
CDS:T22F3.3a 3581398 3582078 1
CDS:T22F3.3a 3582454 3582675 1
CDS:T22F3.3a 3582732 3583288 1
CDS:T22F3.3a 3583595 3584552 1
CDS:T22F3.3a 3584613 3584789 1

1 Sequence

Length
2649

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T22F3.3a.1 T22F3.3a.1 3047   V: 3579023-3585042