WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22F3.4a.1 Sequence Name  T22F3.4a.1
Length (nt)  654   Chromosome Location  V: 3585312-3586064
Chromosome . Primary Identifier  V Chromosome Location . Start  3585312
Chromosome Location . End  3586064 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22F3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004422 rpl-11.1 T22F3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22F3.4a T22F3.4a 591   V: 3585369-3585608

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22F3.4a.1 3585312 3586064 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177348   297   V: 3585312-3585608 Caenorhabditis elegans
Exon177349   216   V: 3585658-3585873 Caenorhabditis elegans
Exon177350   141   V: 3585924-3586064 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22F3.4a.1 3585312 3586064 -1

1 Sequence

Length
654

1 Sequence Ontology Term

Identifier Name Description
transcript