WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22F3.7.1 Sequence Name  T22F3.7.1
Length (nt)  1473   Chromosome Location  V: 3597670-3600670
Chromosome . Primary Identifier  V Chromosome Location . Start  3597670
Chromosome Location . End  3600670 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22F3.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020697 T22F3.7 T22F3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22F3.7 T22F3.7 1362   V: 3597753-3597842

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22F3.7.1 3597670 3600670 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177374   173   V: 3597670-3597842 Caenorhabditis elegans
Exon177375   154   V: 3597890-3598043 Caenorhabditis elegans
Exon177376   111   V: 3598089-3598199 Caenorhabditis elegans
Exon177377   81   V: 3598254-3598334 Caenorhabditis elegans
Exon177378   209   V: 3598594-3598802 Caenorhabditis elegans
Exon177379   342   V: 3598864-3599205 Caenorhabditis elegans
Exon177380   106   V: 3599705-3599810 Caenorhabditis elegans
Exon177381   122   V: 3599856-3599977 Caenorhabditis elegans
Exon177382   124   V: 3600175-3600298 Caenorhabditis elegans
Exon177383   51   V: 3600620-3600670 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22F3.7.1 3597670 3600670 -1

1 Sequence

Length
1473

1 Sequence Ontology Term

Identifier Name Description
transcript