WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22F3.10.1 Sequence Name  T22F3.10.1
Length (nt)  2511   Chromosome Location  V: 3606748-3611754
Chromosome . Primary Identifier  V Chromosome Location . Start  3606748
Chromosome Location . End  3611754 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22F3.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020699 T22F3.10 T22F3.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22F3.10 T22F3.10 1362   V: 3606818-3606904

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22F3.10.1 3606748 3611754 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177393   157   V: 3606748-3606904 Caenorhabditis elegans
Exon177395   154   V: 3606959-3607112 Caenorhabditis elegans
Exon177396   111   V: 3607870-3607980 Caenorhabditis elegans
Exon177397   81   V: 3608030-3608110 Caenorhabditis elegans
Exon177398   209   V: 3608168-3608376 Caenorhabditis elegans
Exon177399   342   V: 3609300-3609641 Caenorhabditis elegans
Exon177400   106   V: 3609684-3609789 Caenorhabditis elegans
Exon177401   122   V: 3609831-3609952 Caenorhabditis elegans
Exon177402   124   V: 3610026-3610149 Caenorhabditis elegans
Exon177403   1105   V: 3610650-3611754 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22F3.10.1 3606748 3611754 -1

1 Sequence

Length
2511

1 Sequence Ontology Term

Identifier Name Description
transcript