WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39H10B.1a.1 Sequence Name  Y39H10B.1a.1
Length (nt)  1026   Chromosome Location  V: 3664871-3666987
Chromosome . Primary Identifier  V Chromosome Location . Start  3664871
Chromosome Location . End  3666987 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39H10B.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006164 str-113 Y39H10B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39H10B.1a Y39H10B.1a 1026   V: 3664871-3664956

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39H10B.1a.1 3664871 3666987 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177487   86   V: 3664871-3664956 Caenorhabditis elegans
Exon177490   178   V: 3665002-3665179 Caenorhabditis elegans
Exon177491   201   V: 3665668-3665868 Caenorhabditis elegans
Exon177492   64   V: 3665969-3666032 Caenorhabditis elegans
Exon177493   135   V: 3666078-3666212 Caenorhabditis elegans
Exon177494   79   V: 3666256-3666334 Caenorhabditis elegans
Exon177495   85   V: 3666657-3666741 Caenorhabditis elegans
Exon177496   198   V: 3666790-3666987 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39H10B.1a.1 3664871 3666987 -1

1 Sequence

Length
1026

1 Sequence Ontology Term

Identifier Name Description
transcript