WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39H10B.2a.1 Sequence Name  Y39H10B.2a.1
Length (nt)  1064   Chromosome Location  V: 3668764-3670784
Chromosome . Primary Identifier  V Chromosome Location . Start  3668764
Chromosome Location . End  3670784 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39H10B.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044527 Y39H10B.2 Y39H10B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39H10B.2a Y39H10B.2a 765   V: 3668779-3668957

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39H10B.2a.1 3668764 3670784 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177552   194   V: 3668764-3668957 Caenorhabditis elegans
Exon177554   66   V: 3669702-3669767 Caenorhabditis elegans
Exon177555   144   V: 3669881-3670024 Caenorhabditis elegans
Exon177558   224   V: 3670071-3670294 Caenorhabditis elegans
Exon177563   436   V: 3670349-3670784 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39H10B.2a.1 3668764 3670784 1

1 Sequence

Length
1064

1 Sequence Ontology Term

Identifier Name Description
transcript